Oh ok, I understand now. Well, I understand in a very general way, but not enough to respond to your concerns.
Don't the nodes of the polygons come in pairs though? If I draw a polygon, and look in the XML Editor, the d attribute values use the comma and space routine.
Or does the extension look at the attributes with "sodipodi" in the name? Those look like they might be coordinates?
Hhmm.... I don't suppose converting your polygons to paths would be a reasonable solution?
Well, we have one or 2 members who I think can probably....well, at least have more helpful comments than me. I don't know when they will visit though.
But still, to discuss in detail, you should probably contact the author of the extension. If something is wrong, they can fix it. If it needs to be bumped up to developers, they can do that too.
(Note that Inkscape developers rarely participate in forums. Here's more info on how to contact, fyi:
https://forum.inkscapecommunity.com)/index.php?topic=628.0)
Edit
Actually I'm going to move this to the Beyond the Basics board. There will be a link on the board index page.